Biobank and Protocol Support Core

Peripheral Blood Sample

Peripheral Blood Sample

Overview

The mission of the Katz Biobank and Protocol Support Core is to promote and support clinical, translational, and basic research that involves human biospecimens. A range of services are provided, including support for biobanking, clinical research, and clinical trials.

Services

  • The Core provides guidance on development of standard operating procedures (SOPs) for blood, urine, and other biosamples, and facilitates interactions between basic and translational researchers and clinical staff.  Additional consultation is available in regard to project design, feasibility, biosafety, technical considerations, sample processing protocols, and shipping.
  • Based on approved IRB protocols, the core staff perform processing and short- or long-term storage of biospecimens.  The biobank works with medical informatics staff to ensure appropriate clinical annotation of de-identified specimens
  • The Core provides assistance in establishing an effective logistical flow for sample acquisition for clinical trials, and performs sample preparation as specified by SOPs.  Specimen processing capacities include automated processing, DNA and RNA isolation, genotyping, and sequencing.

Katz users can visit the Katz Portal to learn more about these services and how to access them. For non-Katz users: please contact the Manager.

Equipment

CLIA certified laboratory

is equipped with a biosafety cabinet, refrigerated centrifuges, -80° C and -20° C freezers, and 4° C refrigerator. The facility has routine collaborative access to the following equipment to support analysis of DNA and RNA: 

  • 2 Applied Biosystems QuantStudio 7 Flex Real-Time PCR Systems with QuantStudio Software for QPCR
  • Illumina MiSeq
  • ABI 3500xL fluorescent sequencer for Sanger Sequencing
  • 2 Oxford Nanopore Minions and Flongle
  • Oxford Nanopore P2
  • Covaris S2 Ultrasonicator w/ GE MultiTemp III chiller
  • Qiagen EZ1 Advanced XL for nucleic acid purification
  • NanoDrop ND-1000 UV-Vis Spectrophotometer
  • Qiagen QiaCube for nucleic acid purification

Contact Information

Katz users can visit the Katz Portal to learn more about these services and how to access them. For external users: please contact the Manager.

Director/Manager
Director: Glenn S. Gerhard, MD
CLIA certified Manager: Nana Kwasi Nyantakyi

Biobank and Protocol Support Core Location:
Lab 1, 10th Floor, Parkinson Pavilion
Hours of Operation: Monday - Friday 9am-5pm